Louis, MO, USA) not noted by the ATCC 700601 strain. As with the V. natriegens and V. fischeri strains, V. cholerae strains ATCC click here 14541, ATCC 11629 and ATCC 25847 also shared identical 16S rRNA gene sequence homogeneity yet produced IGS-patterns that separated the strain
ATCC 14541 away from the other two strains (ATCC 11629 and ATCC 25847). This might reflect the fact that ATCC 14541 was originally deposited with ATCC as V. albensis and later, erroneously, reclassified as V. cholera as a consequence of 16S rRNA gene sequence composition. Evidence of intra-species divergence by IGS-typing analysis To further explore the extent of this intra-species divergence phenomenon, 36 strains of V. parahaemolyticus and V. vulnificus, obtained from various Dorsomorphin supplier geographical locations, were evaluated by this IGS-typing method. Interestingly, a significant degree of heterogeneity in the IGS-pattern obtained from the V. parahaemolyticus isolates was observed, where the UPGMA analysis separated the V. parahaemolyticus strains into five distinct clusters (Figure 4). These clusters were more clearly observed in a 3D multidimensional scaling (MDS) analysis (Figure
5). In this view, distinct genetic partitions were noted, separated by substantial see more divergence among IGS-type patterns. Figure 4 BioNumerics-derived UPGMA dendrogram depicting results obtained from IGS-typing of the 36 Vibrio parahaemolyticus strains. The UPGMA analysis separated the V. parahaemolyticus strains into five distinct clusters. Parameters used to produce the dendrogram were: Dice. (Opt:1.00%) (Tol 0.55%-0.55%) (H>0.0% S>0.0%) [0.0%-100.0%]. Figure 5 BioNumerics-derived MDS representing results shown in UPGMA dendrogram of V. parahaemolyticus and V. vulnificus. The graphs shown of V.parahaemolyticus (Figure 4) and V. vulnificus (Figure 6) are depicted in a 3-dimensional format to better illustrate the genetic divergence between discrete clusters. V. parahaemolyticus is shown in the MDS on the left,
while the MDS presented on the right is for V. vulnificus. Similarly, although, to a lesser extent, the V. vulnificus strains demonstrated IGS-pattern heterogeneity that UPGMA analysis partitioned into four distinct clusters (Figure 5 and 6). Two of these four clusters were Coproporphyrinogen III oxidase comprised of one strain, each signaling rare and unique genotypes for these patterns. Based on the limited population examined, it is notable that the four clusters can be easily distinguished since the IGS-types are substantially diverged and largely unique both in band composition and in major size shifts. A good example is pattern cluster one, which retains a band uniquely missing in pattern four (Figure 6). Figure 6 BioNumerics-derived UPGMA dendrogram obtained following the IGS-typing of the 36 V. vulnificus strains. The UPGMA analysis separated the V. vulnificus strains into four distinct clusters.